• 2021
  • 2021
    报告人:Dr. Liping Wang
  • 2020
    报告人:Dr. Shuo Liu
  1. Lozano-Durán R*, Dong S*.. Plant biotic interactions: From fundamental research toward sustainable agriculture. J Integr Plant Biol. 2021, 63(2):275-276. doi: 10.1111/jipb.13072.. [Full Text]

  2. Yang CH#, Wang C#, Singh S#, Fan N, Liu S, Zhao L, Cao H, Xie W, Yang C*, Huang CF*.. Golgi-localized manganese transporter PML3 regulates Arabidopsis growth through modulating Golgi glycosylation and cell wall biosynthesis. New Phytol. 2021. doi: 10.1111/nph.17209.. [Full Text]

  3. Zhang YZ#, Lin J#, Ren Z#, Chen CX#, Miki D#, Xie SS, Zhang J, Chang YN, Jiang J, Yan J, Li QQ*, Zhu JK*, Duan CG*.. Genome-wide distribution and functions of the AAE complex in epigenetic regulation in Arabidopsis. J Integr Plant Biol. 2021. doi: 10.1111/jipb.13068.. [Full Text]

  4. Sang Y#, Yu W#, Zhuang H, Wei Y, Derevnina L, Yu G, Luo J, Macho AP*.. Intra-strain Elicitation and Suppression of Plant Immunity by Ralstonia solanacearum Type-III Effectors in Nicotiana benthamiana. Plant Commun. 2021,1(4):100025. doi: 10.1016/j.xplc.2020.100025.. [Full Text]

  5. Zhang H#*, Zhao Y, Zhu JK*.. Thriving under Stress: How Plants Balance Growth and the Stress Response. Dev Cell. 2020,55(5):529-543. doi: 10.1016/j.devcel.2020.10.012.. [Full Text]

  6. Liu P#, Nie WF#*, Xiong X, Wang Y, Jiang Y, Huang P, Lin X, Qin G, Huang H, Niu Q, Du J, Lang Z, Lozano‐Duran R, Zhu JK*.. A novel protein complex that regulates active DNA demethylation in Arabidopsis. J Integr Plant Biol. 2020. doi: 10.1111/jipb.13045.. [Full Text]

  7. Zhang YZ#, Yuan J#, Zhang L#, Chen C, Wang Y, Zhang G, Peng L, Xie SS, Jiang J, Zhu JK*, Du J*, Duan CG*.. Coupling of H3K27me3 recognition with transcriptional repression through the BAH-PHD-CPL2 complex in Arabidopsis. Nat Commun. 2020, 11(1):6212. doi: 10.1038/s41467-020-20089-0.. [Full Text]

  8. Zeng W#, Huang H#, Lin X, Zhu C, Kosami KI, Huang C, Zhang H, Duan CG, Zhu JK*, Miki D*.. Roles of DEMETER in regulating DNA methylation in vegetative tissues and pathogen resistance. J Integr Plant Biol. 2020. doi: 10.1111/jipb.13037.. [Full Text]

  9. Miki D#*, Zinta G, Zhang W, Peng F, Feng Z, Zhu JK.. CRISPR/Cas9-Based Genome Editing Toolbox for Arabidopsis thaliana. Methods Mol Biol. 2021, 2200:121-146.. [Full Text]

  10. Lu Y#, Ronald PC, Han B, Li J, Zhu JK*.. Rice protein tagging project: a call for international collaborations on genome-wide in-locus tagging of rice proteins. Mol Plant. 2020. doi: 10.1016/j.molp.2020.11.006.. [Full Text]

  11. Yu G*#, Xian L, Zhuang H, Macho AP*.. SGT1 is not required for plant LRR-RLK-mediated immunity. Mol Plant Pathol. 2020. doi: 10.1111/mpp.13012.. [Full Text]

  12. Yang R#, He L, Huang H, Zhu JK, Lozano-Duran R, Zhang H*.. RNA-directed DNA methylation has an important developmental function in Arabidopsis that is masked by the chromatin remodeller PICKLE. J Integr Plant Biol. 2020, 62(11):1647-1652.. [Full Text]

  13. Tang D#, Gallusci P, Lang Z*.. Fruit development and epigenetic modifications. New Phytol. 2020. doi: 10.1111/nph.16724.. [Full Text]

  14. Garnelo Gόmez B#, Rosas-Díaz T, Shi C, Fan P, Zhang D, Rufián JS, Lozano-Durán R*.. The viral silencing suppressor P19 interacts with the receptor-like kinases BAM1 and BAM2 and suppresses the cell-to-cell movement of RNA silencing independently of its ability to bind sRNA. New Phytol. 2020. doi: 10.1111/nph.16981.. [Full Text]

  15. Lu Y#*, Tian Y#, Shen R, Yao Q, Zhong D, Zhang X, Zhu JK*.. Precise Genome Modification in Tomato Using an Improved Prime Editing System. Plant Biotechnol J. 2020. doi: 10.1111/pbi.13497.. [Full Text]

  16. Fang Q#, Zhang J#, Zhang Y, Fan N, Burg HA, Huang CF*.. Regulation of Aluminum Resistance in Arabidopsis Involves the SUMOylation of the Zinc Finger Transcription Factor STOP1. Plant Cell. 2020. doi:10.1105/tpc.20.00687.. [Full Text]

  17. Wang L#, Ding Y, He L, Zhang G, Zhu JK, Lozano-Duran R*.. A virus-encoded protein suppresses methylation of the viral genome through its interaction with AGO4 in the Cajal body. eLife. 2020, 9:e55542. doi: 10.7554/elife.55542.. [Full Text]

  18. Chen K#, Gao J#, Sun S#, Zhang Z, Yu B, Li J, Xie C, Li G, Wang P, Song CP, Bressan RA, Hua J, Zhu JK*, Zhao Y*.. BONZAI Proteins Control Global Osmotic Stress Responses in Plants. Curr Biol. 2020, 30:1-11. doi: 10.3389/fbioe.2020.00977.. [Full Text]

  19. Liu S#, Zhao L, Liao Y, Luo Z, Wang H, Wang P, Zhao H, Xia J, Huang CF*.. Dysfunction of the 4-Coumarate:Coenzyme A Ligase 4CL4 impacts aluminum resistance and lignin accumulation in rice. Plant J. 2020. doi: 10.1111/tpj.14995.. [Full Text]

  20. Zhang J#, Zhang YZ, Jiang J, Duan CG*.. The Crosstalk Between Epigenetic Mechanisms and Alternative RNA Processing Regulation. Front Genet. 2020, 11:998. doi: 10.3389/fgene.2020.00998.. [Full Text]

  21. Garnelo Gόmez B#, Rosas-Díaz T, Shi C, Fan P, Zhang D, Rufián JS, Lozano-Durán R*.. The viral silencing suppressor P19 interacts with the receptor-like kinases BAM1 and BAM2 and suppresses the cell-to-cell movement of RNA silencing independently of its ability to bind sRNA. New Phytol. 2020. doi: 10.1111/nph.16981.. [Full Text]

  22. Yu G#, Xian L, Xue H, Yu W, Rufian JS, Sang Y, Morcillo RJL, Wang Y, Macho AP.. A bacterial effector protein prevents MAPK-mediated phosphorylation of SGT1 to suppress plant immunity. PLoS Pathogens. 2020, 16(9):e1008933. doi: 10.1371/journal.ppat.1008933.. [Full Text]

  23. Luo X#, Ou Y#, Li R#, He Y*.. Maternal transmission of the epigenetic ‘memory of winter cold’ in Arabidopsis. Nat Plants. 2020. doi: 10.1038/s41477-020-00774-0.. [Full Text]

  24. Kong X#, Hong Y#, Hsu YF, Huang H, Liu X, Song Z, Zhu JK*.. SIZ1-mediated SUMOylation of ROS1 Enhances Its Stability and Positively Regulates Active DNA Demethylation in Arabidopsis. Mol Plant. 2020. S1674-2052(20)30305-1.doi: 10.1016/j.molp.2020.09.010.. [Full Text]

  25. Wang F#, Fang J#, Guan K, Luo S, Dogra V, Li B, Ma D, Zhao X, Lee KP, Sun P, Xin J, Liu T, Xing W*, Kim C*.. The Arabidopsis CRUMPLED LEAF protein, a homolog of the cyanobacterial bilin lyase, retains the bilin-binding pocket for a yet unknown function. Plant J. 2020. doi: 10.1111/tpj.14974.. [Full Text]

  26. Medina-Puche L#, Tan H, Dogra V, Wu M, Rosas-Diaz T, Wang L, Ding X, Zhang D, Fu X, Kim C, Lozano-Durán R*.. A Defense Pathway Linking Plasma Membrane and Chloroplasts and Co-opted by Pathogens. Cell. 2020. doi: 10.1016/j.cell.2020.07.020.. [Full Text]

  27. Li B#, Fang J#, Singh RM, Zi H, Lv S, Liu R, Dogra V*, Kim C*. FATTY ACID DESATURASE5 Is Required to Induce Autoimmune Responses in Gigantic Chloroplast Mutants of Arabidopsis. Plant Cell. 2020. doi: 10.1105/tpc.20.00016.. [Full Text]

  28. Liu X#*, Yang H, Wang Y, Zhu Z, Zhang W, Li J*.. Comparative transcriptomic analysis to identify brassinosteroid response genes. Plant Physiol. 2020. pp.00386.2020. doi: 10.1104/pp.20.00386.. [Full Text]

  29. Xian L# , Yu G# , Wei Y, RufianV JS; Li Y, Zhuang H, Xue H, Morcillo RJL, Macho AP* .. A Bacterial Effector Protein Hijacks Plant Metabolism to Support Pathogen Nutrition. Cell Host & Microbe. 2020. doi: 10.1016/j.chom.2020.07.003.. [Full Text]

  30. Wei Y#, Balaceanu A, Rufian JS, Segonzac C, Zhao A, Morcillo RJL, Macho AP*.. An immune receptor complex evolved in soybean to perceive a polymorphic bacterial flagellin. Nat Commun. 2020. doi:10.1038/s41467-020-17573-y.. [Full Text]

  31. Zhao C#*, Jiang W, Zayed O, Liu X, Tang K, Nie W, Li Y, Xie S, Li Y, Long T, Liu L, Zhu Y, Zhao Y, Zhu JK*.. The LRXs-RALFs-FER module controls plant growth and salt stress responses by modulating multiple plant hormones.Natl Sci Rev. 2020. doi: 10.1093/nsr/nwaa149.. [Full Text]

  32. Vílchez JI#, Yang Y, He D, Zi H, Peng L, Lv S, Kaushal R, Wang W, Huang W, Liu R, Lang Z, Miki D, Tang K, Paré PW, Song CP, Zhu JK, Zhang H* .. DNA demethylases are required for myo-inositol-mediated mutualism between plants and beneficial rhizobacteria. Nat Plants. 2020. doi: 10.1038/s41477-020-0707-2.. [Full Text]

  33. Lu Y#, Tian Y#, Shen R, Yao Q, Wang M, Chen M, Dong J, Zhang T, Li F, Lei M, Zhu JK*.. Targeted, efficient sequence insertion and replacement in rice. Nat Biotechnol. 2020. doi: 10.1038/s41587-020-0581-5.. [Full Text]

  34. Hong Y#, Wang Z#, Shi H, Yao J, Liu X, Wang F, Zeng L, Xie Z, Zhu JK*.. Reciprocal Regulation Between Nicotinamide Adenine Dinucleotide Metabolism and Abscisic Acid and Stress Response Pathways in Arabidopsis. PLoS Genet. 2020.doi: 10.1371/journal.pgen.1008892.. [Full Text]

  35. Li J#, Yang DL, Huang H, Zhang G, He L, Pang J, Lozano-Durán R, Lang Z, Zhu JK* .. Epigenetic memory marks determine epiallele stability at loci targeted by de novo DNA methylation. Nat Plants. 2020. doi: 10.1038/s41477-020-0671-x.. [Full Text]

  36. Tang D#, Gallusci P, Lang Z* .. Fruit development and epigenetic modifications. New Phytol. 2020. doi: 10.1111/nph.16724.. [Full Text]

  37. Guo J#, Zhang Y, Gao H, Li S, Wang ZY, Huang CF*.. Mutation of HPR1 encoding a component of the THO/TREX complex reduces STOP1 accumulation and aluminum resistance in Arabidopsis thaliana. New Phytol. 2020. doi: 10.1111/nph.16658.. [Full Text]

  38. Lee KP#, Liu K, Kim EY, Medina-Puche L, Dong H, Duan J, Li M, Dogra V, Li Y, Lv R, Li Z, Lozano-Duran R, Kim C* .. PLANT NATRIURETIC PEPTIDE A and Its Putative Receptor PNP-R2 Antagonize Salicylic Acid-mediated Signaling and Cell Death. Plant Cell. 2020. doi: 10.1105/tpc.20.00018.. [Full Text]

  39. Chang YN# , Zhu C, Jiang J, Zhang H, Zhu JK, Duan CG*.. Epigenetic regulation in plant abiotic stress responses. J Integr Plant Biol. 2020, 62(5):563-580. doi: 10.1111/jipb.12901.. [Full Text]

  40. Hua K#, Jiang Y#, Tao X#, Zhu JK*.. Precision genome engineering in rice using prime editing system. Plant Biotechnol J. 2020. doi: 10.1111/pbi.13395.. [Full Text]

  41. Zhu Z#, Zhang H*.. It Takes NSUN2 to Beat the Heat in Rice. Dev Cell. 2020, 53(3):253-254.doi: 10.1016/j.devcel.2020.04.011.. [Full Text]

  42. Zhao C*# , Zhang H, Song C, Zhu JK*, Shabala S*.. Mechanisms of plant responses and adaptation to soil salinity. The Innovation. 2020. doi:
        . [Full Text]

  43. Xue H#, Lozano-Durán R*, Macho AP*.. Insights into the Root Invasion by the Plant Pathogenic Bacterium Ralstonia solanacearum. Plants (Basel). 2020, 9(4): E516. doi: 10.3390/plants9040516.. [Full Text]

  44. Tang K#, Zhao L#, Ren Y#, Yang S, Zhu JK, Zhao C* .. The transcription factor ICE1 functions in cold stress response by binding to the promoters of CBF and COR genes. J Integr Plant Biol. 2020,62(3):258-263. doi: 10.1111/jipb.12918.. [Full Text]

  45. Morcillo RJL#, Zhao A, Tamayo-Navarrete MI, García-Garrido JM, Macho AP* .. Tomato Root Transformation Followed by Inoculation with Ralstonia Solanacearum for Straightforward Genetic Analysis of Bacterial Wilt Disease. J Vis Exp. 2020,157: e60302. doi:10.3791/60302.. [Full Text]

  46. Morcillo RJL#, Singh SK#, He D, Vílchez JI, Kaushal R, Wang W, Huang W, Paré PW, Zhang H* .. Bacteria-derived diacetyl enhances Arabidopsis phosphate starvation responses partially through the DELLA-dependent gibberellin signaling pathway.Plant Signal Behav. 2020 :1740872. doi: 10.1080/15592324.2020.1740872.. [Full Text]

  47. Wang Z#, Hong Y#, Zhu G#, Li Y, Niu Q, Yao J, Hua K, Bai J, Zhu Y, Shi H, Huang S*, Zhu JK*.. Loss of Salt Tolerance During Tomato Domestication Conferred by Variation in a Na+/K+ Transporter.EMBO J2020, e103256. doi: 10.15252/embj.2019103256.. [Full Text]

  48. Li Z#, Dogra V#, Lee KP, Li R, Li M, Li M, Kim C* .. N-terminal acetylation stabilizes SIGMA FACTOR BINDING PROTEIN 1 involved in salicylic acid-primed cell death. Plant Physiol. 2020, pii: pp.01417.2019. doi:10.1104/pp.19.01417.. [Full Text]

  49. Ding Y#, Lozano-Durán R*.. The Cajal Body in Plant-Virus Interactions. Viruses. 2020, 12(2): E250. doi:10.3390/v12020250.. [Full Text]

  50. Zhang N#, Meng Y#, Li X, Zhou Y, Ma L, Fu L, Schwarzländer M, Liu H, Xiong Y*.. Metabolite-mediated TOR signaling regulates the circadian clock in Arabidopsis. Proc Natl Acad Sci U S A, 116 (51), 25395-25397. doi: 10.1073/pnas.1913095116.. [Full Text]

  51. Kim C#*. ROS-Driven Oxidative Modification: Its Impact on Chloroplasts-Nucleus Communication. Front Plant Sci. 2020,10:1729. doi: 10.3389/fpls.2019.01729.. [Full Text]

  52. Wang Q#, Qin G#, Cao M, Chen R, He Y, Yang L, Zeng Z, Yu Y, Gu Y, Xing W, Tao WA, Xu T*. A phosphorylation-based switch controls TAA1-mediated auxin biosynthesis in plants. Nat Commun. 2020,11(1):679. doi: 10.1038/s41467-020-14395-w.. [Full Text]

  53. Lin Z#, Li Y#, Zhang Z#, Liu X#, Hsu CC, Du Y, Sang T, Zhu C, Wang Y, Satheesh V, Pratibha P, Zhao Y, Song CP, Tao WA, Zhu JK*, Wang P*. A RAF-SnRK2 kinase cascade mediates early osmotic stress signaling in higher plants. Nat Commun. 2020,11(1):613. doi: 10.1038/s41467-020-14477-9.. [Full Text]

  54. Wang P#*, Hsu CC#, Du Y#, Zhu P, Zhao C, Fu X, Zhang C, Paez JS, Macho AP, Tao WA*, Zhu JK*.. Mapping proteome-wide targets of protein kinases in plant stress responses. Proc Natl Acad Sci U S A. 2020. pii: 201919901. doi: 10.1073/pnas.1919901117.. [Full Text]

  55. Fu L#, Wang P*, Xiong Y*. . Target of Rapamycin Signaling in Plant Stress Responses. Plant Physiol. 2020. pii: pp.01214.2019. doi: 10.1104/pp.19.01214.. [Full Text]

  56. Niu D#, He Y*.. LEAFY COTYLEDONs: old genes with new roles beyond seed development. F1000Res. 2019:8. pii: F1000 Faculty Rev-2144. doi: 10.12688/f1000research.21180.1.. [Full Text]

  57. Vivek Dogra#, Chanhong Kim*.. Singlet Oxygen Metabolism: From Genesis to Signaling. Front. Plant Sci.. 2020. doi: 10.3389/fpls.2019.01640.. [Full Text]

  58. Yu H#, Kong X#, Huang H, Wu W, Park J, Yun D, Lee B, Shi H*, Zhu JK*.. STCH4/REIL2 Confers Cold Stress Tolerance in Arabidopsis by Promoting rRNA Processing and CBF Protein Translation. Cell Reports. 2020, 30(1):229-242.e5. doi:10.1016/j.celrep.2019.12.012.. [Full Text]

  59. Medina-Puche L#, Lozano-Duran R*.. Tailoring the cell: a glimpse of how plant viruses manipulate their hosts. Curr Opin Plant Biol. 2019, 52:164-173. doi: 10.1016/j.pbi.2019.09.007.. [Full Text]

  60. Niu Q#, Wu S#, Yang X, Liu P, Xu Y, Lang Z*. Expanding the scope of CRISPR/Cas9-mediated genome editing in plants using an xCas9 and Cas9-NG hybrid. J Integr Plant Biol. 2019. doi: 10.1111/jipb.12886.. [Full Text]

  61. Garnelo Gómez B#, Zhang D, Rosas-Díaz T, Wei Y, Macho AP, Lozano-Durán R*.. The C4 Protein from Tomato Yellow Leaf Curl Virus Can Broadly Interact with Plant Receptor-Like Kinases. Viruses. 2019,11(11): 1009. doi:org/10.3390/v11111009.. [Full Text]

  62. Xu J#, Hua K , Lang Z* .. Genome Editing for Horticultural Crop Improvement. Horticulture Research. 2019,6:113.doi:org/10.1038/s41438-019-0196-5.. [Full Text]

  63. Liu R# , Lang Z*. . The mechanism and function of active DNA demethylation in plants. J Integr Plant Biol. 2019. doi: 10.1111/jipb.12879.. [Full Text]

  64. Zeng X#, Gao Z#, Jiang C, Yang Y, Liu R, He Y*.. HISTONE DEACETYLASE 9 functions with Polycomb silencing to repress FLOWERING LOCUS C expression. Plant Physiol. 2019. pii: pp.00793.2019. doi: 10.1104/pp.19.00793.. [Full Text]

  65. Corrales-Gutierrez M#, Medina-Puche L, Yu Y, Wang L, Ding X, Luna AP, Bejarano ER, Castillo AG*, Lozano-Duran R*.. The C4 protein from the geminivirus Tomato yellow leaf curl virus confers drought tolerance in Arabidopsis through an ABA‐independent mechanism. Plant Biotechnol J. 2019. doi: 10.1111/pbi.13280.. [Full Text]

  66. Peng F#, Zhang W#, Zeng W, Zhu JK*, Miki D*.. Gene targeting in Arabidopsis via an all-in-one strategy that uses a translational enhancer to aid Cas9 expression. 2019. doi: 10.1111/pbi.13265. [Epub ahead of print]. [Full Text]

  67. Dogra V, Kim C*. . Chloroplast protein homeostasis is coupled with retrograde signaling. Plant Signaling & Behavior. 2019,1-4. doi: 10.1080/15592324.2019.1656037.. [Full Text]

  68. Jiménez-Gόngora T#, Tan H, Lozano-Durán R*. . Transient overexpression of E2Fb triggers cell divisions in pavement cells of Nicotiana benthamiana leaves. Plant Cell Reports. 2019, doi:10.1007/s00299-019-02457-3.. [Full Text]

  69. Wang P#, Yao S#, Kosami KI, Guo T, Li J, Zhang Y, Fukao Y, Kaneko-Kawano T, Zhang H, She YM, Wang P, Xing W, Hanada K, Liu R*, Kawano Y*. . Identification of endogenous small peptides involved in rice immunity through transcriptomics- and proteomics-based screening. Plant Biotechnol J. 2019, doi: 10.1111/pbi.13208.. [Full Text]

  70. Miao C#, Wang Z#, Zhang L, Yao J, Hua K, Liu X, Shi H, Zhu JK*.. The grain yield modulator miR156 regulates seed dormancy through the gibberellin pathway in rice.Nature Communications. 2019,10(1):3822. doi: 10.1038/s41467-019-11830-5.. [Full Text]

  71. Dong J#,Ma G#,Sui L#, Wei M, Satheesh V, Zhang R, Ge S, Li J, Zhang T, Wittwer C, Jessen HJ, Zhang H, An G, Chao D, Liu D, Lei M*. . Inositol Pyrophosphate InsP8 Acts as an Intracellular Phosphate Signal in Arabidopsis. Mol plant. 2019. doi:10.1016/j.molp.2019.08.002.. [Full Text]

  72. Nie W#, Lei M#, Zhang M, Tang K, Huang H, Zhang C, Miki D, Liu P, Yang Y, Wang X, Zhang H, Lang Z, Liu N, Xu X, Yelagandula R, Zhang H, Wang Z, Chai X, Andreucci A, Yu J, Berger F, Lozano-Duran R, Zhu JK*. . Histone acetylation recruits the SWR1 complex to regulate active DNA demethylation in Arabidopsis. PNAS. 2019. doi:10.1073/pnas.1906023116.. [Full Text]

  73. Zhang H*#, Zhang K, Zhu JK*. . A model for the aberrant DNA methylomes in aging cells and cancer cells. Biochemical Society Transactions. 2019. pii: BST20180218. doi: 10.1042/BST20180218.. [Full Text]

  74. Dogra V#, Li M#, Singh S#, Li M, Kim C*. Oxidative post-translational modification of EXECUTER1 is required for sensing singlet oxygen in plastids. Nat Commun. 2019. Doi: 10.1038/s41467-019-10760-6.. [Full Text]

  75. Chen Zhu#, Ting Liu, Ya-Nan Chang, Cheng-Guo Duan*. Small RNA Functions as a Trafficking Effector in Plant Immunity. International Journal of Molecular Sciences. 2019, 20(11). pii: E2816. doi: 10.3390/ijms20112816.. [Full Text]

  76. Jiali Duan*, Keun Pyo Lee*, Vivek Dogra*, Siyuan Zhang, Kaiwei Liu, Carlos Caceres-Moreno, Shanshan Lv, Weiman Xing, Yusuke Kato, Wataru Sakamoto, Renyi Liu, Alberto P Macho, Chanhong Kim#. Impaired PSII proteostasis promotes retrograde signaling via salicylic acid. Plant physiology. 2019. doi: 10.1104/pp.19.00483.. [Full Text]

  77. Rosa Lozano-Duran*,Alberto Macho*. Molecular dialogues between viruses and receptor‐like kinases in plants.Molecular Plant Pathology.2019. doi:10.1111/mpp.12812.. [Full Text]

  78. Chunzhao Zhao*#, Omar Zayed#, Fansuo Zeng, Chaoxian Liu, Ling Zhang, Peipei Zhu, Chuan‐Chih Hsu, Yunus E. Tuncil, W. Andy Tao, Nicholas C. Carpita, Jian‐Kang Zhu*. Arabinose biosynthesis is critical for salt stress tolerance in Arabidopsis.New Phytol.2019.doi:10.1111/nph.15867.. [Full Text]

  79. Vivek Dogra#, Jianli Duan#, Keun Pyo Lee, Chanhong Kim*. Impaired PSII proteostasis triggers an UPR-like response in the var2 mutant of Arabidopsis thaliana. J Exp Bot. 2019. pii: erz151. doi: 10.1093/jxb/erz151.. [Full Text]

  80. Paolo Pesaresi, Chanhong Kim*. Current understanding of GUN1: a key mediator involved in biogenic retrograde signaling. Plant Cell Rep. 2019. doi: 10.1007/s00299-019-02383-4.. [Full Text]

  81. Mugui Wang#,Zhidan Wang#,Yanfei Mao,Yuming Lu,Ruifang Yang,Xiaoping Tao,Jian-Kang Zhu*. Optimizing Base Editors for Improved Efficiency and Expanded Editing Scope in Rice.Plant Biotechnol J.2019.doi:10.1111/pbi.13124. [Full Text]

  82. Zeng Tao, Hongmiao Hu, Xiao Luo, Bei Jia, Jiamu Du*, Yuehui HE* . Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.Nature plants.2019.doi:10.1038/s41477-019-0402-3.. [Full Text]

  83. Min Cao#, Rong Chen#, Pan Li#, Yongqiang Yu, Rui Zheng, Danfeng Ge, Wei Zheng, Xuhui Wang, Yangtao Gu, Zuzana Gelová, Jiří Friml, Heng Zhang, Renyi Liu, Jun He, Tongda Xu*. TMK1-mediated auxin signalling regulates differential growth of the apical hook.Nature.2019.doi:10.1038/s41586-019-1069-7.. [Full Text]

  84. Shuzhi Zheng#, Hongmiao Hu, Huimin Ren, Zhenlin Yang, Qi Qiu, Weiwei Qi, Xinye Liu, Xiaomei Chen, Xiekui Cui, Sisi Li, Bing Zhou, Daye Sun*, Xiaofeng Cao* , Jiamu Du* .(2019). The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.Nature Communications .2019,10:1303.doi:10.1038/s41467-019-09310-x. [Full Text]

  85. Changsong Zou#, Leiting Li, Daisuke Miki, Delin Li, Qiming Tang, Lihong Xiao, Santosh Rajput, Ping Deng, Li Peng, Wei Jia, Ru Huang, Meiling Zhang, Yidan Sun, Jiamin Hu, Xing Fu, Patrick S. Schnable , Yuxiao Chang, Feng Li, Hui Zhang, Baili Feng, Xinguang Zhu, Renyi Liu , James C. Schnable, Jian-Kang Zhu*, Heng Zhang*. (2019). The genome of broomcorn millet. Nature Communications. 2019;10(1):436.doi:10.1038/s41467-019-08409-5.. [Full Text]

  86. Yu Yang#, Kai Tang#, Tatsiana U Datsenka#, Wenshan Liu, Suhui Lv, Zhaobo Lang, Xingang Wang, Jinghui Gao, Wei Wang, Wenfeng Nie, Zhaoqing Chu, Heng Zhang, Avtar K Handa, Jian-Kang Zhu, Huiming Zhang*. (2019). Critical function of DNA methyltransferase 1 in tomato development and regulation of the DNA methylome and transcriptome. JIPB. 2019. doi: 10.1111/jipb.12778.. [Full Text]

  87. Huan Huang#, Ruie Liu#, Qingfeng Niu, Kai Tang, Bo Zhang, Heng Zhang, Kunsong Chen, Jian-Kang Zhu*, Zhaobo Lang*.(2019). Global increase in DNA methylation during orange fruit development and ripening. PNAS. 2019.pii: 201815441. doi:10.1073/pnas.1815441116.. [Full Text]

  88. Jinshan Zhang#, Hui Zhang, Ashish Kumar Srivastava, Yujie Pan, Jinjuan Bai, Jingjing Fang, Huazhong Shi, Jian-Kang Zhu*. (2018). Knockdown of Rice MicroRNA166 Confers Drought Resistance by Causing Leaf Rolling and Altering Stem Xylem Development. Plant Physiology. 2018,176(3):2082-2094.doi:10.1104/pp.17.01432.. [Full Text]

  89. Ruiqing Lv#, Zihao Li#, Mengping Li, Vivek Dogra, Shanshan Lv, Renyi Liu, Keun Pyo Lee*, Chanhong Kim*. (2019). Uncoupled Expression of Nuclear and Plastid Photosynthesis-associated Genes Contributes to Cell Death in a Lesion Mimic Mutant. The Plant Cell. 2019, doi:10.1105/tpc.18.00813.. [Full Text]

  90. Xinlong Xiao#, Jieqiong Zhang, Tao Li, Xing Fu, Viswanathan Satheesh, Qingfeng Niu, Zhaobo Lang, Jian-Kang Zhu*, Mingguang Lei*. (2018). A Group of SUVH Methyl-DNA Binding Proteins Regulate Expression of the DNA Demethylase ROS1 in Arabidopsis. JIPB. doi: 10.1111/jipb.12768.. [Full Text]

  91. Jingfei Cheng#, Qingfeng Niu#, Bo Zhang, Kunsong Chen, Yang Ruihua, Jian-Kang Zhu, Yijing Zhang*, Zhaobo Lang*. (2018). Downregulation of RdDM during strawberry fruit ripening. Genome Biology. 2018;19(1):212.doi: 10.1186/s13059-018-1587-x.. [Full Text]

  92. Yang Zhang#, Jie Zhang#, Jinliang Guo#, Fanglin Zhou, Somesh Singh, Xuan Xu, Qi Xie, Zhongbao Yang,Chao-Feng Huang*. (2018). F-box protein RAE1 regulates the stability of the aluminum-resistance transcription factor STOP1 in Arabidopsis. PNAS. [Full Text]

  93. Zhengyan Feng#, Zhengjing Zhang, Kai Hua, Xifeng Gao, Yanfei Mao, Jose Ramon Botella, Jian-Kang Zhu *. (2018). A Highly Efficient Cell Division-Specific CRISPR/Cas9 System Generates Homozygous Mutants for Multiple Genes in Arabidopsis. International journal of molecular sciences. 2018,19(12),3925;doi:10.3390/ijms19123925.. [Full Text]

  94. Juan Ignacio Vílchez#, Qiming Tang, Richa Kaushal, Wei Wang, Suhui Lv, Danxia He, Zhaoqing Chu, Heng Zhang, Renyi Liu, Huiming Zhang* (2018). Complete Genome Sequence of Bacillus megaterium Strain TG1-E1,a Plant Drought Tolerance-Enhancing Bacterium. Microbiology Resource Announcements. 2018,7(12). pii: e00842-18.doi: 10.1128/MRA.00842-18.. [Full Text]

  95. Heng Zhang #*, Yuanyuan Li, Jian-Kang Zhu*. (2018). Developing naturally stress-resistant crops for a sustainable agriculture. Nature Plants. 2018;doi: 10.1038/s41477-018-0309-4.. [Full Text]

  96. Pengcheng Wang#, Yang Zhao#, Zhongpeng Li#, Chuan-Chih Hsu#, Xue Liu, Liwen Fu, Yueh-Ju Hou, Yanyan Du, Shaojun Xie, Chunguang Zhang, Jinghui Gao, Minjie Cao, Xiaosan Huang, Yingfang Zhu, Kai Tang, Xingang Wang, W. Andy Tao, Yan Xiong*, Jian-Kang Zhu*. (2018). Reciprocal Regulation of the TOR Kinase and ABA Receptor Balances Plant Growth and Stress Response. Mol Cell. 2018. doi:10.1016/j.molcel.2017.12.002. [Full Text]

  97. Cheng-Guo Duan#*, Jian-Kang Zhu*, Xiao feng Cao*. (2018). Retrospective and perspective of plant epigenetics in China. Journal of genetics and genomics. 2018, pii: S1673-8527(18)30188-7. doi: 10.1016/j.jgg.2018.09.004.. [Full Text]

  98. Gang Yu#, Liu Xian, Yuying Sang, Alberto P. Macho*. (2018). Cautionary notes on the use of Agrobacterium-mediated transient gene expression upon SGT1 silencing in Nicotiana benthamiana. New Phytologist. 2018.doi: 10.1111/nph.15601.. [Full Text]

  99. Hong Liang#, Yi Zhang, Pablo Martinez, Carolyn G. Rasmussen, Tongda Xu*, Zhenbiao Yang*. (2018). The Microtubule-Associated Protein IQ67 DOMAIN5 Modulates Microtubule Dynamics and Pavement Cell Shape. Plant Physiology. 2018,177(4):1555-1568.doi:10.1104/pp.18.00558.. [Full Text]

  100. Qiong Wang#, Yuying Li#, Kazuya Ishikawa, Ken-ichi Kosami, Kazumi Uno, Shingo Nagawa, Li Tan, Jiamu Du, Ko Shimamoto, Yoji Kawano*.(2018). Resistance protein Pit interacts with the GEF OsSPK1 to activate OsRac1 and trigger rice immunity. PNAS. 2018.pii: 201813058.doi:10.1073/pnas.1813058115.. [Full Text]

  101. Hui Li# , Nan Luo, Weidong Wang, Zengyu Liu, Jisheng Chen, Liangtao Zhao, Li Tan, Chunyan Wang, Yuan Qin, Chao Li, Tongda Xu, Zhenbiao Yang*.(2018). The REN4 rheostat dynamically coordinates the apical and lateral domains of Arabidopsis pollen tubes. Nature Communications. 2018;9: 2573.doi:[10.1038/s41467-018-04838-w].. [Full Text]

  102. Vivek Dogra#, Jean-David Rochaix, Chanhong Kim*.(2018). Singlet oxygen-triggered chloroplast-to-nucleus retrograde signalling pathways: An emerging perspective. Plant,Cell&Environment. 2018.41(8):1727-1738.doi:10.1111/pce.13332.. [Full Text]

  103. Juan Ignacio Vílchez#, Qiming Tang#, Richa Kaushal, Shenglan Chen, Renyi Liu*, Huiming Zhang*.(2018). Genome Sequence of Bacillus cereus Strain TG1-6, a Plant-Beneficial Rhizobacterium That Is Highly Salt Tolerant. Genome Announcements. 2018.6(19). pii:e00351-18.doi:10.1128/genomeA.00351-18.. [Full Text]

  104. Huiming Zhang#*, Zhaobo Lang, Jian-Kang Zhu*.(2018). Dynamics and function of DNA methylation in plants.Nature Reviews Molecular Cell Biology.2018.19(8):489-506. doi:10.1038/s41580-018-0016-z.. [Full Text]

  105. Juan Ignacio Vílchez#, Qiming Tang, Richa Kaushal, Wei Wang, Suhui Lv, Danxia He, Zhaoqing Chu, Heng Zhang, Renyi Liu, Huiming Zhang*.(2018). Genome Sequence of Bacillus megaterium Strain YC4-R4, a Plant Growth-Promoting Rhizobacterium Isolated from a High-Salinity Environment. Genome Announcements.2018.6(25). pii: e00527-18. doi: 10.1128/genomeA.00527-18.. [Full Text]

  106. Wei Chen#, Pingping Gong, Jingzhe Guo, Hui Li, Ruizi Li, Weiman Xing, Zhenbiao Yang, Yuefeng Guan*.(2018). Glycolysis regulates pollen tube polarity via Rho GTPase signaling.PLOS GENETICS.2018.14(4):e1007373. doi: 10.1371/journal.pgen.1007373.. [Full Text]

  107. Cuijun Zhang#, Xuan Du#, Kai Tang#, Zhenlin Yang, Li Pan, Peipei Zhu, Jinyan Luo, Yuwei Jiang, Hui Zhang, Huafang Wan, Xingang Wang, Fengkai Wu, W. Andy Tao, Xin-Jian He, Heng Zhang, Ray A. Bressan, Jiamu Du*, Jian-Kang Zhu*.(2018). Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin.Nature Communication.2018;9: 4547.doi:[10.1038/s41467-018-06965-w].. [Full Text]

  108. Xiao Luo#, Zheng Gao#, Yizhong Wang, Zhijuan Chen, Wenju Zhang, Jirong Huang , Hao Yu, Yuehui He*.(2018). The NUCLEAR FACTOR-CONSTANS complex antagonizes Polycomb repression to de-repress FLOWERING LOCUS T expression in response to inductive long days in Arabidopsis. The Plant Journal.2018.95(1):17-29. doi: 10.1111/tpj.13926.. [Full Text]

  109. Zicong Li#, Yang Ou, Zhicheng Zhang, Jianming Li, Yuehui He*.(2018). Brassinosteroid Signaling Recruits Histone 3 Lysine-27 Demethylation Activity to FLOWERING LOCUS C Chromatin to Inhibit the Floral Transition in Arabidopsis.Molecular Plant . 2018.11(9):1135-1146. doi: 10.1016/j.molp.2018.06.007.. [Full Text]

  110. Yuehui He#*, Zicong Li.(2018). Epigenetic Environmental Memories in Plants: Establishment, Maintenance, and Reprogramming.Trends in Genetics. 2018.34(11):856-866. doi: 10.1016/j.tig.2018.07.006.. [Full Text]

  111. Zicong Li#, Danhua Jiang, Yuehui He*.(2018). FRIGIDA establishes a local chromosomal environment for FLOWERING LOCUS C mRNA production. Nature Plants. 2018.4(10):836-846. doi: 10.1038/s41477-018-0250-6.. [Full Text]

  112. Yuanzheng Wang#, Yansha Li, Tabata Rosas-Diaz, Carlos Caceres-Moreno, Rosa Lozano-Duran, Alberto P. Macho*.(2018). The IMMUNE-ASSOCIATED NUCLEOTIDE-BINDING 9 Protein Is a Regulator of Basal Immunity in Arabidopsis thaliana. Molecular Plant-Microbe Interactions. 2018.ZMPMI03180062R. doi: 10.1094/MPMI-03-18-0062-R.. [Full Text]

  113. Chunbo Miao#, Lihong Xiao, Kai Hua, Changsong Zou, Yang Zhao, Ray A. Bressan, Jian-Kang Zhu*. (2018). Mutations in a subfamily of abscisic acid receptor genes promote rice growth and productivity. PNAS. 2018.115(23):6058-6063. doi: 10.1073/pnas.1804774115.. [Full Text]

  114. Kai Hua#, Xiaoping Tao, Jian-Kang Zhu*(2018). Expanding the base editing scope in rice by using Cas9 variants. Plant Biotechnology Journal. doi: 10.1111/pbi.12993.. [Full Text]

  115. Zhaobo Lang#*, Zhizhong Gong*(2018). A role of OsROS1 in aleurone development and nutrient improvement in rice. PNAS. doi:10.1073/pnas.1815760115.. [Full Text]

  116. Jinshan Zhang#, Hui Zhang*, José Ramón Botella*, Jian-Kang Zhu*(2018). Generation of new glutinous rice by CRISPR/Cas9-targeted mutagenesis of the Waxy gene in elite rice varieties.JIPB.2018.60(5):369-375. doi: 10.1111/jipb.12620.. [Full Text]

  117. Yanfei Mao#, Xiaoxuan Yang, Yiting Zhou, Zhengjing Zhang, Jose Ramon Botella, Jian-Kang Zhu*(2018). Manipulating plant RNA-silencing pathways to improve the gene editing efficiency of CRISPR/Cas9 systems.Genome Biology.2018.19(1):149. doi: 10.1186/s13059-018-1529-7.. [Full Text]

  118. Haifeng Zhu#, Wenxiang Xie, Dachao Xu, Daisuke Miki, Kai Tang, Chao-Feng Huang*, Jian-Kang Zhu*(2018). DNA demethylase ROS1 negatively regulates the imprinting of DOGL4 and seed dormancy in Arabidopsis thaliana. PNAS. 2018.115(42):E9962-E9970. doi:10.1073/pnas.. [Full Text]

  119. Dong-Lei Yang#*, Guiping Zhang, Lili Wang, Jingwen Li, Dachao Xu, Cuiru Di, Kai Tang, Lan Yang, Liang Zeng, Daisuke Miki, Cheng-Guo Duan, Huiming Zhang & Jian-Kang Zhu* (2018). Four putative SWI2/SNF2 chromatin remodelers have dual roles in regulating DNA methylation in Arabidopsis. Cell Discovery. 2018. 16;4:55. doi: 10.1038/s41421-018-0056-8. [Full Text]

  120. Mugui Wang#*, Yanfei Mao ,Yuming Lu, Zhidan Wang, Xiaoping Tao, Jian‐Kang Zhu*. (2018). Multiplex gene editing in rice with simplified CRISPR‐Cpf1 and CRISPR‐Cas9 systems. JIPB. 2018. 60(8):626-631. doi: 10.1111/jipb.12667.. [Full Text]

  121. Xueqin Li#, C. Jake Harris#, Zhenhui Zhong, Wei Chen, Rui Liu, Bei Jia, Zonghua Wang, Sisi Li, Steven E. Jacobsen*, and Jiamu Du*. (2018). Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation. PNAS. [Full Text]

  122. Shuiming Qian*, Xinchen Lv*, Ray N. Scheid*, Li Lu, Zhenlin Yang, Wei Chen, Rui Liu,Melissa D. Boersma, John M. Denu, Xuehua Zhong# &Jiamu Du#. Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL. Nature Communacations. 9: 2425. [Full Text]

  123. Zhenlin Yang*, Shuiming Qian, Ray N. Scheid, Li Lu, Xiangsong Chen, Rui Liu, Xuan Du, Xinchen Lv, Melissa D. Boersma, Mark Scalf, Lloyd M. Smith, John M. Denu, Jiamu Du# & Xuehua Zhong#. (2018) . EBS is a bivalent histone reader that regulates floral phase transition in Arabidopsis. Nature Gentics. doi: 10.1038/s41588-018-0187-8. [Full Text]

  124. Zicong Li*, Xing Fu, Yizhong Wang, Renyi Liu & Yuehui He#. (2018). Polycomb-mediated gene silencing by the BAH–EMF1 complex in plants. Nature Genetics. doi: 10.1038/s41588-018-0190-0. [Full Text]

  125. ZhenWang#, FuxingWang, YechunHong, JuanjuanYao, ZhizhongRen, HuazhongShi, Jian-KangZhu#. (2018). The Flowering Repressor SVP Confers Drought Resistance in Arabidopsis by Regulating Abscisic Acid Catabolism. Molecular Plant. [Full Text]

  126. Zhao Y#, Zhang Z, Gao J, Wang P, Hu T, Wang Z, Hou YJ, Wan Y, Liu W, Xie S, Lu T, Xue L, Liu Y, Macho AP, Tao WA, Bressan RA, Zhu JK#. (2018) . Arabidopsis Duodecuple Mutant of PYL ABA Receptors Reveals PYL Repression of ABA-Independent SnRK2 Activity. Cell Reports. 23(11): 3340–3351. [Full Text]

  127. Daisuke Miki*#, Wenxin Zhang*, Wenjie Zeng, Zhengyan Feng & Jian-Kang Zhu #. (2018). . CRISPR/Cas9-mediated gene targeting in Arabidopsis using sequential transformation. Nature Communications. 9(1):1967. [Full Text]

  128. Kai Hua*, Xiaoping Tao, Fengtong Yuan, Dong Wang, Jian-kang Zhu#. (2018). Precise A·T to G·C base editing in the rice genome. Molecular Plant DOI: [Full Text]

  129. Tabata Rosas-Diaz*, Dan Zhang, Pengfei Fan, Liping Wang, Xue Ding, Yuli Jiang, Tamara Jimenez-Gongora, Laura Medina-Puche, Xinyan Zhao, Zhengyan Feng, Guiping Zhang, Xiaokun Liu, Eduardo R. Bejaranod, Li Tan, Heng Zhanga, Jian-Kang Zhu, Weiman Xing, Christine Faulkner, Shingo Nagawa, and Rosa Lozano-Dura#. A virus-targeted plant receptor-like kinase promotes cell-to-cell spread of RNAi. Proceedings of the National Academy of Sciences of the United States of America. 2018. doi: 10.1073/pnas.1715556115
        . [Full Text]

  130. Yali Wei*, Carlos Caceres-Moreno, Tamara Jimenez-Gongora, Keke Wang, Yuying Sang, Rosa Lozano-Duran , Alberto P. Macho#. The Ralstonia solanacearum csp22 peptide, but not flagellin-derived peptides, is perceived by plants from the Solanaceae family. Plant Biotechnology Journal. 2017. doi: 10.1111/pbi.12874. [Full Text]

  131. Ying-Ge Wang, Feng-Ling Fu, Hao-Qiang Yu, Tao Hu, Yuan-Yuan Zhang, Yi Tao, Jian-Kang Zhu, Yang Zhao#, Wan-Chen Li. Interaction network of core ABA signaling components in maize. 2018, Plant Molecular Biology [PDF]

  132. Yingfang Zhu*#, Bangshing Wang, Kai Tang, Chuan-Chih Hsu, Shaojun Xie, Hai Du, Yuting Yang, Weiguo Andy Tao, Jian-Kang Zhu*#. An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress. Plos Genetics. 2017. ttps://
        . [Full Text]

  133. Zhenlin Yang*, Qi Qiu, Wei Chen, Bei Jia, Xiaomei Chen, Hongmiao Hu, Kaixuan He, Xian Deng, Sisi Li, W Andy Tao, XiaoFeng Cao, Jiamu Du#. Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases. The Plant Cell. 2017. DOI:
        . [Full Text]

  134. Rosa Lozano-Durán*#, Youssef Belkhadir. A technical framework for studying the signaling nexus of brassinosteroids and immunity. Methods in Molecular Biology, 2017,1564:49-61.. [Full Text]

  135. Tábata Rosas-Díaz*, Dan Zhang, and Rosa Lozano-Durán#. No evidence of seed transmissibility of Tomato yellow leaf curl virus in Nicotiana benthamiana, Journal of Zhejiang University-SCIENCE B, 2017, 18(5):437-440.. [Full Text]

  136. Liping Wang*, Xue Ding, Jiajing Xiao,Tamara Jiménez-Gόngora, Renyi Liu#, Rosa Lozano-Durán#. Inference of a geminivirus-host protein-protein interaction network through affinity purification and mass spectrometry analysis, Viruses, 2017, 9(10). pii: E275, doi: 10.3390/v9100275.. [Full Text]

  137. Yanfei Mao*#, Jose Ramon Botella, Jian-Kang Zhu*#. Heritability of targeted gene modifications induced by plant-optimized CRISPR systems. Cellular and Molecular Life Sciences. (2017) 74:1075–1093. [Full Text]

  138. Yuming Lu*, Jian-Kang Zhu*#. Precise Editing of a Target Base in the Rice Genome Using a Modified CRISPR/Cas9 System. Molecular Plant. 2017 ;10(3):523-525.. [Full Text]

  139. Yuming Lu*, Xiao Ye, Renming Guo, Jing Huang, Wei Wang, Jiuyou Tang, Longtao Tan, Jian-kang Zhu, Chengcai Chu, Yangwen Qian#. Genome-wide Targeted Mutagenesis in Rice Using the CRISPR/Cas9 System. Molecular Plan. 2017, 10(9): p1242–1245. [Full Text]

  140. Chengguo Duan,* Jian-Kang Zhu*#. Dissecting the Subnuclear Localization Patterns of Argonaute Proteins and Other Components of the RNA-Directed DNA Methylation Pathway in Plants. Methods in Molecular Biology. 2017;1640:129-135.. [Full Text]

  141. Kai Tang , Cheng-Guo Duan, Huiming Zhang, Jian-Kang Zhu. Computational Analysis of Genome-Wide ARGONAUTE-Dependent DNA Methylation in Plants. Methods in Molecular biology. 2017;1640:219-225.. [Full Text]

  142. Srivastava AK, Lu Y, Zinta G, Lang Z, Zhu JK.. UTR-Dependent Control of Gene Expression in Plants. Trends in plant science. 2017,doi: 10.1016/j.tplants.2017.11.003. [Full Text]

  143. Zhang J*, Zhang H, Botella JR, Zhu JK*. Generation of new glutinous rice by CRISPR/Cas9-targeted mutagenesis of the Waxy gene in elite rice varieties. Journal of Integrative Plant Biology. 2017, doi: 10.1111/jipb.12620.. [Full Text]

  144. Vivek Dogra*, Jianli Duan, Keun Pyo Lee, Shanshan Lv, Renyi Liu, and Chanhong Kim,*. FtsH2-Dependent Proteolysis of EXECUTER1 Is Essential in Mediating Singlet Oxygen-Triggered Retrograde Signaling in Arabidopsis thaliana. Frontiers in Plant Science. 2017, doi: 10.3389/fpls.2017.01145
        . [Full Text]

  145. Rui Liu*, Xueqin Li, Wei Chen, Jiamu Du*. Structure and mechanism of plant histone mark reader. Science China Life Sciences. 2017. doi: 10.1007/s11427-017-9163-4.. [Full Text]

  146. Yu Yang, Honggui La, Kai Tang, Daisuke Miki, Lan Yang, Bangshing Wang, Cheng-Guo Duan, Wenfeng Nie, Xingang Wang, Siwen Wang, Yufeng Pan, Elizabeth J. Tran, Lizhe An, Huiming Zhang,* and Jian-Kang Zhu,*. SAC3B, a central component of the mRNA export complex TREX-2, is required for prevention of epigenetic gene silencing in Arabidopsis. [Full Text]

  147. Huiming Zhang ,Jian-Kang Zhu. New discoveries generate new questions about RNA-directed DNA methylation in Arabidopsis. National Science Review, 2017, 4(1):10–15. [Full Text]

  148. Yidan Sun,* Keke Wang*, Carlos Caceres-Moreno*, Wei Jia, Aojun Chen, Heng Zhang, Renyi Liu#, and Alberto P. Macho#. Genome sequencing and analysis of Ralstonia solanacearum phylotype I strains FJAT-91, FJAT-452 and FJAT-462 isolated from tomato, eggplant, and chili pepper in China. Standards in Genomics Sciences. 2017, doi: 10.1186/s40793-017-0241-7.. [Full Text]

  149. Yali Wei*, Yuying Sang*, and Alberto P. Macho#. The Ralstonia solanacearum Type III Effector RipAY Is Phosphorylated in Plant Cells to Modulate Its Enzymatic Activity. Frontiers in Plant Science. 2017, doi: 10.3389/fpls.2017.01899. [Full Text]

  150. Dong Wang, Zhipeng Qu, Lan Yang, Qingzhu Zhang, Zhi-Hong Liu, Trung Do, David L. Adelson, Zhen-Yu Wang, Iain Searle, and Jian-Kang Zhu*. Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in plants. Plant Journal. 2017;90(1):133-146. [Full Text]

  151. Daisuke Miki, Peiying Zhu,Wencan Zhang,Yanfei Mao, Zhengyan Feng, Huan Huang,Hui Zhang, Yanqiang Li, Renyi Liu, Huiming Zhang, Yijun Qi, and Jian-Kang Zhu. Efficient Generation of diRNAs Requires Components in the Posttranscriptional Gene Silencing Pathway. Scientific Reports. 2017,doi:10.1038/s41598-017-00374-7. [Full Text]

  152. Yu Yang, Wei Wang, Zhaoqing Chu, Jian-Kang Zhu and Huiming Zhang. Roles of Nuclear Pores and Nucleo-cytoplasmic Trafficking in Plant Stress Responses. Frontiers in Plant Science. 2017,8:574.. [Full Text]

  153. Yang Zhao, Jinghui Gao, Jeong Im Kim ,Kong Chen ,Ray A. Bressan ,Jian-Kang Zhu. Control of Plant Water Use by ABA Induction of Senescence and Dormancy: An Overlooked Lesson from Evolution. Plant &Cell Physiology. 2017 ;58(8):1319-1327. Plant &Cell Physiology. 2017 ;58(8):1319-1327 target="_blank">[Full Text]

  154. Zhao C, Wang P, Si T, Hsu CC, Wang L, Zayed O, Yu Z, Zhu Y, Dong J, Tao WA, Zhu JK. MAP Kinase Cascades Regulate the Cold Response by Modulating ICE1 Protein Stability. Developmental Cell. 2017, 43(5):618-629. [Full Text]

  155. Zhizhong Ren, Zhen Wang, X. Edward Zhou, Huazhong Shi, Yechun Hong, Minjie Cao, Zhulong Chan, Xue Liu, H. Eric Xu& Jian-Kang Zhu . Structure determination and activity manipulation of the turfgrass ABA receptor FePYR1.ScientificReports, 2017,doi: 10.1038/s41598-017-14101-9. [Full Text]

  156. Min-Jie Cao, Yu-Lu Zhang, Xue Liu, Huan Huang, X. Edward Zhou, Wen-Long Wang, Ai Zeng, Chun-Zhao Zhao, Tong Si, Jiamu Du, Wen-Wu Wu, Fu-Xing Wang, H. Eric Xu& Jian-Kang Zhu. Combining chemical and genetic approaches to increase drought resistance in plants. Nature Communication. 2017;8(1):1183. [Full Text]

  157. Zeng Tao,Lisha Shen,Xiaofeng Gu,Yizhong Wang,Hao Yu& Yuehui He. 2017. . Embryonic epigenetic reprogramming by a pioneer transcription factor in plants. Nature. doi:10.1038/nature24300. [Full Text]

  158. Cheng-Guo Duan#*, Xingang Wang#, Lingrui Zhanga,b,c, Xiansong Xionga,b, Zhengjing Zhang, Kai Tang, Li Pan, Chuan-Chih Hsu, Huawei Xu, W. Andy Tao, Heng Zhang, and Jian-Kang Zhu*. 2017.. A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis. PNAS. 114(35):E7377–E7384. [Full Text]

  159. Zhaobo Lang#*, Yihai Wang, Kai Tang, Dengguo Tang, Tatsiana Datsenk, Jingfei Cheng, Yijing Zhang, Avtar K. Handa, and Jian-Kang Zhu#. (2017). Critical roles of DNA demethylation in the activation of ripening-induced genes and inhibition of ripening-repressed genes in tomato fruit. PNAS. E4511–E4519, doi: 10.1073/pnas.1705233114. [Full Text]

  160. Mugui Wang#, Yanfei Mao#, Yuming Lu, Xiaoping Tao, Jian-kang Zhu*.. Multiplex Gene Editing in Rice using the CRISPR-Cpf1 System. Molecular Plant. 2017. doi: 10.1016/j.molp.2017.03.001. [Full Text]

  161. Xiaojuan Li#, Wenguo Cai#, Yanlin Liu#, Hui Li, Liwen Fu, Zengyu Liu, Lin Xu, Hongtao Liu, Tongda Xu*, and Yan Xiong*.. Differential TOR activation and cell proliferation in Arabidopsis root and shoot apexes.2017,114(10):2765-2770. [Full Text]

  162. Rong Yang, Zhimin Zheng, Qing Chen, Lan Yang, Huan Huang, Daisuke Miki, Wenwu Wu, Liang Zeng, Jun Liu, Jin-Xing Zhou, Joe Ogas, Jian-Kang Zhu, Xin-Jian He and Heng Zhang*. (2017). . The developmental regulator PKL is required to maintain correct DNA methylation patterns at RNA-directed DNA methylation loci. Genome Biology,18:103.DOI: 10.1186/s13059-017-1226-y.. [Full Text]

  163. Hui Zhang# ,Jinshan Zhang# , Jun Yan, Feng Gou, Yanfei Mao, Guiliang Tang, Jose Ramon Botella and Jian-Kang Zhu*.. 2017. Short tandem target mimic rice lines uncover novel functions of miRNAs in regulating important agronomic traits. Proc. Natl. Acad. Sci. U. S. A.doi: 10.1073/pnas.1703752114. [Full Text]

  164. Jun Yan# ,Pengcheng Wang# ,Bangshing Wang, Chuan-Chih Hsu, Kai Tang, Hairong Zhang,Yueh-Ju Hou,Yang Zhao, Qiming Wang, Chunzhao Zhao, Xiaohong Zhu,W. Andy Tao,Jianming Li,Jian-Kang Zhu*. 2017.The SnRK2 kinases modulate miRNA accumulation in Arabidopsis. PLoS Genetics,13(4):e1006753. doi: 10.1371/journal.pgen.1006753.. [Full Text]

  165. Yueh-Ju Hou#,Yingfang Zhu#,Pengcheng Wang#,Yang Zhao,Shaojun Xie, Giorgia Batelli,Bangshing Wang,Cheng-Guo Duan,Xingang Wang,Lu Xing,Mingguang Lei,Jun Yan,Xiaohong Zhu,Jian-Kang Zhu*.(2016). Type One Protein Phosphatase 1 and Its Regulatory Protein Inhibitor 2 Negatively Regulate ABA Signaling.PLoS Genetics 12(3): e1005835. doi:10.1371/journal.pgen.1005835. [Full Text]

  166. Macho A.P.(2016). Subversion of plant cellular functions by bacterial type-III effectors: beyond suppression of immunity. New Phytologist,210: 51–57.doi:10.1111/nph.13605. [Full Text]

  167. Rosas-Díaz T., Macho A.P., Beuzón C.R., Lozano-Durán R.* and Bejarano E.R.* (2016).. The C2 Protein from the GeminivirusTomato Yellow Leaf Curl Sardinia Virus Decreases Sensitivity to Jasmonates and Suppresses Jasmonate-Mediated Defences. Plants. 5(1),8.. [Full Text]

  168. Dong-Lei Yang#,Guiping Zhang#,Kai Tang,Jingwen Li, Lan Yang, Huan Huang,Heng Zhang and Jian-Kang Zhu*.(2015). Dicer-independent RNA-directed DNA methylation in Arabidopsis. Cell Research doi:10.1038/cr.2015.145. [Full Text]

  169. Zhulong Chan*,Yanping Wang,Minjie Cao,Yuehua Gong,Zixin Mu,Haiqing Wang,Yuanlei Hu,Xin Deng,Xin-Jian He,Jian-Kang Zhu*.(2015). RDM4 modulates cold stress resistance in Arabidopsis partially through the CBF-mediated pathway. New Phytologist, doi: 10.1111/nph.13727. [Full Text]

  170. Chizuko Yamamuro*,Jian-Kang Zhu,Zhenbiao Yang.(2015). Epigenetic modifications and plant hormone action. Molecular Plant,doi: 10.1016/j.molp.2015.10.008.. [Full Text]

  171. . . [Full Text]

  172. Xiangqiang Zhan, Bilian Qian, Fengqiu Cao, Wenwu Wu, Lan Yang, Qingmei Guan, Xianbin Gu, Pengcheng Wang, Temiloluwa A. Okusolubo, Stephanie L. Dunn, Jian-Kang Zhu&Jianhua Zhu.(2015).. An Arabidopsis PWI and RRM motif-containing protein is critical for pre-mRNA splicing and ABA responses.Nature Communicaitons,6:8139.doi:10.1038/ncomms9139. [Full Text]

  173. Jingjing Fang, Guochen Qin, Jun Ma, Yi-Min She*. (2015).Quantification of plant cell wall monosaccharides by reversed-phase liquid chromatography with 2-aminobenzamide pre-column derivatization and a non-toxic reducing reagent 2-picoline borane. Journal of Chromatography A. 1414:122-128. [Full Text]

  174. Yanfei Mao#, Zhengjing Zhang#, Zhengyan Feng#, Pengliang Wei, Hui Zhang, Jose Ramon Botella and Jian-Kang Zhu*(2015).. Development of germ-line-specific CRISPR-Cas9 systems to improve the production of heritable gene modifications in Arabidopsis.plant Biotechnology Journal,doi: 10.1111/pbi.12468. [Full Text]

  175. Jiamu Du,Lianna M. Johnson,Steven E. Jacobsen* and Dinshaw J. Patel*. (2015). DNA methylation pathways and their crosstalk with histone methylation.Nature Reviews Molecular Cell Biology 16,519–532. [Full Text]

  176. Shui Wang1, 2, 3 , Yangnan Gu2, 3, Sophia G. Zebell2, 3, Lisa K. Anderson2, Wei Wang2, Rajinikanth Mohan2, Xinnian Dong2. A Noncanonical Role for the CKI-RB-E2F Cell-Cycle Signaling Pathway in Plant Effector-Triggered Immunity Cell Host&MicrobeAvailable online 20 November 2014 DOI: [Full Text]

  177. Wang, Y., Gu, X., Yuan, W., Schmitz, R. and He, Y. . (2014) Photoperiodic control of the floral transition through a distinct Polycomb repressive complex. Developmental Cell, 28(6):727-36
        . [Full Text]

  178. Gu, X., Xu, T., He, Y. . (2014) A histone H3 lysine-27 methyltransferase complex represses lateral root formation in Arabidopsis thaliana. Molecular Plant, 7(6): 977-88. [Full Text]

  179. Gu, X., Wang, Y. &He, Y. . (2013) Photoperiodic regulation of flowering time through periodic histone deacetylation of the florigen gene FT. PLoS Biology, 11: e1001649. [Full Text]

  180. Hui Zhang1, Jinshan Zhang1,2, Pengliang Wei1,2, Botao Zhang1, Feng Gou1,2, Zhengyan Feng1,2,3, Yanfei Mao1, Lan Yang1, Heng Zhang1, Nanfei Xu1,* andJian-Kang Zhu1,4,*. The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation Plant Biotechnology Journal Article first published online: 23 MAY 2014 DOI: 10.1111/pbi.12200. [Full Text]

  181. Weiqiang Qian*, Daisuke Miki*, Mingguang Lei*, Xiaohong Zhu, Huiming Zhang, Yunhua Liu, Yan Li, Zhaobo Lang, Jing Wang, Kai Tang, Renyi Liu, Jian-Kang Zhu. Regulation of Active DNA Demethylation by an α-Crystallin Domain Protein in Arabidopsis Molecular Cell DOI: [Full Text]

  182. Chizuko Yamamuro,Daisuke Miki,Zhimin Zheng,Jun Ma,Jing Wang,Zhenbiao Yang,Juan Dong& Jian-Kang Zhu. Overproduction of stomatal lineage cells in Arabidopsis mutants defective in active DNA demethylation Nature Communications. 5, Article number: 4062 doi:10.1038/ncomms5062 Received 03 March 2014 Accepted 07 May 2014 Published 05 June 2014. [Full Text]

  183. Yang Zhao1,2*, Lu Xing2,3*, Xingang Wang2, Yueh-Ju Hou2, Jinghui Gao2,4, Pengcheng Wang2, Cheng-Guo Duan2, Xiaohong Zhu2, and Jian-Kang Zhu1,2. The ABA Receptor PYL8 Promotes Lateral Root Growth by Enhancing MYB77-Dependent Transcription of Auxin-Responsive Genes Sci. Signal., 3 June 2014 Vol. 7, Issue 328, p. ra53 DOI: 10.1126/scisignal.2005051. [Full Text]

  184. Xu T1,2,3, Dai N, Chen J1, Nagawa S1,3, Cao M, Li H, Zhou Z, Chen X, Rycke R, Rakusova H, Wang W, Jones A, Friml J, Patterson S, Bleecker A, Yang Z.*. Cell Surface ABP1-TMK Auxin-Sensing Complex Activates ROP GTPase Signaling. Science. 2014 Feb 28;343(6174):1025-1028. [Full Text]

  185. Zhengyan Fenga,b,c,1, Yanfei Maoa,1, Nanfei Xua, Botao Zhanga, Pengliang Weia,c, Dong-Lei Yanga, Zhen Wanga,c, Zhengjing Zhanga,c, Rui Zhenga,c, Lan Yanga, Liang Zenga, Xiaodong Liua, Jian-Kang Zhua,d,2. Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis. Proc Natl Acad Sci U S A. 2014 Feb 18. Doi: 10.1073/pnas.1400822111. [Full Text]

  186. Yan Xiong* and Jen Sheen. The role of target of rapamycin signaling networks in plant growth and metabolism. Plant Physiol. 2014 Feb;164(2):499-512. [Full Text]

  187. Mingguang Lei*, Honggui La*, Kun Lu, Pengcheng Wang, Daisuke Miki, Zhizhong Ren, Cheng-Guo Duan, Xingang Wang, Kai Tang, Liang Zeng, Lan Yang, Heng Zhang, Wenfeng Nie, Pan Liu, Jianping Zhou, Renyi Liu, Yingli Zhong, Dong Liu, Jian-Kang Zhu. Arabidopsis EDM2 promotes IBM1 distal polyadenylation and regulates genome DNA methylation patterns. Proc Natl Acad Sci U S A. 2014 Jan 7;111(1):527-32. [Full Text]

  188. Heng Zhang, Xin-Jian He, Jian-Kang Zhu*. RNA-directed DNA methylation in plants: Where to start? RNA biology. 2013 Sep 6;10(10):1593-1596. [Full Text]

  189. Ting Ban, Jiyuan Ke, Runze Chen, Xin Gu, M. H. Eileen Tan, X. Edward Zhou, Yanyong Kang, Karsten Melcher, Jian-Kang Zhu and H. Eric Xu*. Structure of a PLS-Class Pentatricopeptide Repeat Protein Provides Insights into Mechanism of RNA Recognition. J Biol Chem. 2013 Nov 1;288(44):31540-31548. [Full Text]

  190. Chao-Feng Huang, Daisuke Miki, Kai Tang, Hao-Ran Zhou, Zhimin Zheng, Wei Chen, Ze-Yang Ma,Lan Yang, Heng Zhang, Renyi Liu, Xin-Jian He, Jian-Kang Zhu*. A Pre-mRNA-Splicing Factor Is Required for RNA-Directed DNA Methylation in Arabidopsis. PLoS Genet. 2013;9(9):e1003779. [Full Text]

  191. Yanfei Mao, Hui Zhang, Nanfei Xu, Botao Zhang, Feng Gou and Jian-kang Zhu. Application of the CRISPR-Cas system for efficient genome engineering in plants. Mol Plant. 2013 Nov;6(6):2008-11. [Full Text]

  192. Zhengyan Feng*, Botao Zhang*, Wona Ding, Xiaodong Liu, Dong-Lei Yang, Pengliang Wei, Fengqiu Cao, Shihua Zhu, Feng Zhang, Yanfei Mao, Jian-Kang Zhu*. Efficient genome editing in plants using a CRISPR/Cas system. Cell Res. 2013 Oct;23(10):1229-32. [Full Text]

  193. Hao-Ran Zhou*, Fang-Fang Zhang*, Ze-Yang Ma, Huan-Wei Huang, Ling Jiang, Tao Cai, Jian-Kang Zhu, Chuyi Zhang and Xin-Jian He. Folate Polyglutamylation Is Involved in Chromatin Silencing by Maintaining Global DNA Methylation and Histone H3K9 Dimethylation in Arabidopsis. Plant Cell. 2013 Jul;25(7):2545-59. [Full Text]

  194. Kun Dou, Chao-Feng Huang, Ze-Yang Ma, Cui-Jun Zhang, Jin-Xing Zhou, Huan-Wei Huang, Tao Cai, Kai Tang, Jian-Kang Zhu and Xin-Jian He*. The PRP6-like splicing factor STA1 is involved in RNA-directed DNA methylation by facilitating the production of Pol V-dependent scaffold RNAs Nucleic Acids Res. 2013 Oct;41(18):8489-502. [Full Text]

  195. Xiaojie Li, Weiqiang Qian, Yusheng Zhao, Chunlei Wang, Jie Shen, Jian-Kang Zhu* and Zhizhong Gong*. Antisilencing role of the RNA-directed DNA methylation pathway and a histone acetyltransferase in Arabidopsis. Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11425-30. [Full Text]

  196. Weiqiang Qian*, Daisuke Miki*, Heng Zhang, Yunhua Liu, Xi Zhang, Kai Tang, Yunchao Kan, Honggui La, Xiaojie Li, Shaofang Li, Xiaohong Zhu, Xiaobing Shi, Kangling Zhang, Olga Pontes, Xuemei Chen, Renyi Liu, Zhizhong Gong,Jian-Kang Zhu*. A histone acetyltransferase regulates active DNA demethylation in Arabidopsis. Science. 2012; 336(6087):1445-8. [Full Text]

  197. Xiangqiang Zhana,1, Bangshing Wangb,1, Hongjiang Lic, Renyi Liuc, Rajwant K. Kaliad, Jian-Kang Zhua,b,2 and Viswanathan Chinnusamye,2. Arabidopsis proline-rich protein important for development and abiotic stress tolerance is involved in microRNA biogenesis. Proc Natl Acad Sci U S A. 2012; 109(44):18198-203. [Full Text]

  198. Xiaohong Zhu1,*, Ying Feng1, Gaimei Liang1, Na Liu1, Jian-Kang Zhu1,2,*. Aequorin-based luminescence imaging reveals stimulus- and tissue-specific Ca2+ dynamics in Arabidopsis plants. Mol Plant. 2013 Mar;6(2):444-55. [Full Text]

  199. Heng Zhanga,1, Ze-Yang Mab,1, Liang Zenga, Kaori Tanakac, Cui-Jun Zhangb, Jun Maa, Ge Baia, Pengcheng Wangd, Su-Wei Zhangb, Zhang-Wei Liub, Tao Caib, Kai Tangd, Renyi Liue, Xiaobing Shic, Xin-Jian Heb,2, and Jian-Kang Zhua,d,2. DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV. Proc Natl Acad Sci U S A. 2013 May 14;110(20):8290-5. [Full Text]

  200. Minjie Cao1,*, Xue Liu1,2,*, Yan Zhang3, Xiaoqian Xue3,4, X Edward Zhou5, Karsten Melcher5, Pan Gao1, Fuxing Wang1, Liang Zeng1, Yang Zhao6, Yang Zhao7, Pan Deng8, Dafang Zhong8, Jian-Kang Zhu1,6, H Eric Xu2,5 and Yong Xu3. An ABA-mimicking ligand that reduces water loss and promotes drought resistance in plants. Cell Res. 2013 Aug;23(8):1043-54. [Full Text]